News & Updates

• Registration is now open for our Omics Data Science Course: summer bootcamp (Aug. 4 - 8, Tokyo time) or fall regular session (Sep - Nov. Montreal time). Early bird discount ends by June 1, 2025;
• Added support for "Catharanthus roseus" to exclude outlier samples after normalization step (05/15/2025);
• Added "Sample Exclusion" to exclude outlier samples after normalization step (05/10/2025);
• Added Interactive version of PCA diagram during data diagnostics to better identify samples (05/01/2025);
• Fixed the issue for highlighting data points in volcano plot (01/15/2025);
• Upgraded Java from version 17 to Java 21 LTS (12/16/2024);
• Added support to allow users to download all sig. genes in dose response analysis (11/25/2024);
• Fixed an issue for curve fitting when used together with results from DESeq2 (11/07/2024);
• Improved interface and documentations for tPOD calculation based on gene-level BMD (10/29/2024);
• Upgraded to PrimeFaces 14.0.4, and Jakarta EE 10 (09/16/2024);
• Added support for custom gene set library upload for gene expression analysis module (09/05/2024);
• Added QC diagnostics quality metrics based on omics data analysis framework for regulatory application (R-ODAF) (07/05/2024);
• Added QC diagnostics for raw data processing (06/20/2024);
• Added raw data processing support for Clostridium tyrobutyricum (06/13/2024);
• Code refactoring for improved performance (04/29/2024);
• Added KEGG pathway analysis support for Brugia malayi (bmy) (03/13/2024);
• Added support for WormBase Transcript ID for C. elegans (02/12/2024);
• Enabled GSEA support for Arabidopsis thaliana (ATH) (01/23/2024);